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/dartfs-hpc/rc/lab/L/LynchK/gemini_test/gemini3d/build/gemini.bin Process: 36 / 63 at 20261028T120636.127 ******************** input config **************** simulation directory: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug start year-month-day: 2026-02-10 start time: 36900.000 duration: 2400.000 output every: 60.000 gemini.f90: using input data files: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/inputs/simsize.h5 //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/inputs/simgrid.h5 //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/inputs/initial_conditions.h5 no neutral disturbance specified. Precipitation file input cadence (s): 60.000 Precipitation file input source directory: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/inputs/particles Electric field file input cadence (s): 60.000000000000000 Electric field file input source directory: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/inputs/fields no solar flux specified GLOW disabled MSISE00 enabled for neutral atmosphere calculations. EIA disabled Variable background neutral atmosphere disabled. Background precipitation has total energy flux and energy: 0.10000000000000001 1000.0000000000000 Parallel current calculation enabled. Inertial capacitance calculation type: 0 Diffusion solve type: 2 Milestone output disabled. Gravitaional drift terms disabled. Two-way coupling disabled. Lagrangian grid disabled Using default magnetic pole. **************** end input config *************** process grid (Number MPI processes) x2, x3: 32 2 Process:28 at process grid location: 28 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:23 at process grid location: 23 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:17 at process grid location: 17 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:22 at process grid location: 22 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:21 at process grid location: 21 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:37 at process grid location: 5 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:8 at process grid location: 8 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:2 at process grid location: 2 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:10 at process grid location: 10 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:11 at process grid location: 11 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:15 at process grid location: 15 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:14 at process grid location: 14 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:6 at process grid location: 6 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:50 at process grid location: 18 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:53 at process grid location: 21 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:48 at process grid location: 16 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:25 at process grid location: 25 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:45 at process grid location: 13 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:56 at process grid location: 24 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:24 at process grid location: 24 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:43 at process grid location: 11 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:47 at process grid location: 15 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:44 at process grid location: 12 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:35 at process grid location: 3 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:3 at process grid location: 3 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:41 at process grid location: 9 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:16 at process grid location: 16 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:52 at process grid location: 20 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:13 at process grid location: 13 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:63 at process grid location: 31 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:29 at process grid location: 29 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:40 at process grid location: 8 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:9 at process grid location: 9 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:60 at process grid location: 28 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:58 at process grid location: 26 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:32 at process grid location: 0 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:54 at process grid location: 22 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:42 at process grid location: 10 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:33 at process grid location: 1 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:61 at process grid location: 29 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:19 at process grid location: 19 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:4 at process grid location: 4 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:36 at process grid location: 4 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:62 at process grid location: 30 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:31 at process grid location: 31 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:1 at process grid location: 1 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:27 at process grid location: 27 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:5 at process grid location: 5 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:55 at process grid location: 23 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:26 at process grid location: 26 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:12 at process grid location: 12 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:7 at process grid location: 7 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:18 at process grid location: 18 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:49 at process grid location: 17 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:57 at process grid location: 25 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:39 at process grid location: 7 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:51 at process grid location: 19 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:59 at process grid location: 27 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:38 at process grid location: 6 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:20 at process grid location: 20 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:30 at process grid location: 30 0 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:46 at process grid location: 14 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:34 at process grid location: 2 1 get_subgrid_size: 3D run process grid (Number MPI processes) x2, x3: 32 2 Process:0 at process grid location: 0 0 get_subgrid_size: 3D run init_storage_root done enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... gather_grid_root done calc_coord_diffs_root done enforce_gridmpi_periodic done grid_check done Done with read_grid_in... !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! ! Restarting simulation from time: 2026 2 10 37380.000000000000 !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! Treating the following file as initial conditions: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/20260210_37380.000000.h5 full duration: 2400.0000000000000 ; remaining simulation time: 1920.0000000000000 simulation start time: 480.00000000000000 //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/inputs/simsize.h5 input dimensions: 173 64 158 Target (output) grid structure dimensions: 173 64 158 NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... Sent ICs to workers in 1.403E-01 seconds. Initial conditions (root): ------------------------ Min/max input density: 3.44E+08 7.68E+11 Min/max input velocity: -4.00E+01 2.00E+03 Min/max input temperature: 1.83E+02 5.02E+03 Min/max input electric potential: 0.00E+00 0.00E+00 Min/max input electric potential (full grid): 0.00E+00 0.00E+00 Recomputed initial dist. fields via pot2perpfield: gemini 0.0000000000000000 0.0000000000000000 gemini 0.0000000000000000 0.0000000000000000 gemini 0.0000000000000000 0.0000000000000000 gemini 0.0000000000000000 0.0000000000000000 Priming inputdata NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... NOTE: Neutral background to be taken from empirical models... Setting Lagrangian-ness Recomputed initial fields including background (BGfieldLagrangian): 0.0000000000000000 0.0000000000000000 -1.9999999552965164E-002 -1.9999999552965164E-002 -9.9999997764825821E-003 -9.9999997764825821E-003 Recomputed initial drifts: 0.0000000000000000 0.0000000000000000 0.0000000000000000 0.0000000000000000 Starting main loop System sizes according to Phiall: 173 64 158 -->Number of user-defined output variables: 9 HDF5 Output file name: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/20260210_37380.000000.h5 INFO: Input file has selected full output or milestones, large files may result! Writing topside boundary conditions for non-inverted-type grid... Throttling dt to: 2.000E-06 Throttling dt to: 4.000E-06 Throttling dt to: 8.000E-06 Throttling dt to: 16.000E-06 Throttling dt to: 32.000E-06 Throttling dt to: 64.000E-06 Throttling dt to: 128.000E-06 Throttling dt to: 256.000E-06 Current time 2026-02-10 37380.000511; dt=0.000256 Throttling dt to: 512.000E-06 Throttling dt to: 1.024E-03 Throttling dt to: 2.048E-03 Throttling dt to: 4.096E-03 Throttling dt to: 8.192E-03 Throttling dt to: 16.384E-03 Throttling dt to: 32.768E-03 Throttling dt to: 65.536E-03 Current time 2026-02-10 37380.308964; dt=0.088960 Current time 2026-02-10 37381.198439; dt=0.088936 Current time 2026-02-10 37382.087642; dt=0.088908 Current time 2026-02-10 37382.976557; dt=0.088878 Current time 2026-02-10 37383.865174; dt=0.088848 Current time 2026-02-10 37384.753494; dt=0.088818 Current time 2026-02-10 37385.641516; dt=0.088789 Current time 2026-02-10 37386.529245; dt=0.088760 Current time 2026-02-10 37387.416689; dt=0.088732 Current time 2026-02-10 37388.303853; dt=0.088704 Current time 2026-02-10 37389.190746; dt=0.088677 Current time 2026-02-10 37390.077373; dt=0.088651 Current time 2026-02-10 37390.963744; dt=0.088626 Current time 2026-02-10 37391.849863; dt=0.088601 Current time 2026-02-10 37392.735739; dt=0.088577 Current time 2026-02-10 37393.621379; dt=0.088554 Current time 2026-02-10 37394.506791; dt=0.088531 Current time 2026-02-10 37395.391983; dt=0.088509 Current time 2026-02-10 37396.276963; dt=0.088489 Current time 2026-02-10 37397.161738; dt=0.088469 Current time 2026-02-10 37398.046319; dt=0.088450 Current time 2026-02-10 37398.930715; dt=0.088432 Current time 2026-02-10 37399.814936; dt=0.088415 Current time 2026-02-10 37400.698993; dt=0.088399 Current time 2026-02-10 37401.582898; dt=0.088384 Current time 2026-02-10 37402.466664; dt=0.088371 Current time 2026-02-10 37403.350305; dt=0.088359 Current time 2026-02-10 37404.233836; dt=0.088349 Current time 2026-02-10 37405.117275; dt=0.088340 Current time 2026-02-10 37406.000637; dt=0.088333 Current time 2026-02-10 37406.883944; dt=0.088329 Current time 2026-02-10 37407.767213; dt=0.088326 Current time 2026-02-10 37408.650466; dt=0.088325 Current time 2026-02-10 37409.533133; dt=0.088202 Current time 2026-02-10 37410.414448; dt=0.088077 Current time 2026-02-10 37411.294636; dt=0.087974 Current time 2026-02-10 37412.173913; dt=0.087893 Current time 2026-02-10 37413.052482; dt=0.087830 Current time 2026-02-10 37413.930526; dt=0.087786 Current time 2026-02-10 37414.808213; dt=0.087757 Current time 2026-02-10 37415.685693; dt=0.087743 Current time 2026-02-10 37416.563098; dt=0.087741 Current time 2026-02-10 37417.440470; dt=0.087725 Current time 2026-02-10 37418.317563; dt=0.087698 Current time 2026-02-10 37419.194439; dt=0.087681 Current time 2026-02-10 37420.071190; dt=0.087672 Current time 2026-02-10 37420.947899; dt=0.087671 Current time 2026-02-10 37421.824638; dt=0.087677 Current time 2026-02-10 37422.701471; dt=0.087689 Current time 2026-02-10 37423.578454; dt=0.087706 Current time 2026-02-10 37424.455634; dt=0.087728 Current time 2026-02-10 37425.333054; dt=0.087754 Current time 2026-02-10 37426.210752; dt=0.087783 Current time 2026-02-10 37427.088759; dt=0.087816 Current time 2026-02-10 37427.967105; dt=0.087851 Current time 2026-02-10 37428.845806; dt=0.087884 Current time 2026-02-10 37429.724812; dt=0.087914 Current time 2026-02-10 37430.604129; dt=0.087946 Current time 2026-02-10 37431.483779; dt=0.087980 Current time 2026-02-10 37432.363016; dt=0.087866 Current time 2026-02-10 37433.240991; dt=0.087742 Current time 2026-02-10 37434.117760; dt=0.087624 Current time 2026-02-10 37434.993365; dt=0.087509 Current time 2026-02-10 37435.867845; dt=0.087399 Current time 2026-02-10 37436.741248; dt=0.087293 Current time 2026-02-10 37437.613620; dt=0.087192 Current time 2026-02-10 37438.485004; dt=0.087095 Current time 2026-02-10 37439.355442; dt=0.087002 System sizes according to Phiall: 173 64 158 -->Number of user-defined output variables: 9 HDF5 Output file name: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/20260210_37440.000000.h5 INFO: Input file has selected full output or milestones, large files may result! Writing topside boundary conditions for non-inverted-type grid... Throttling dt to: 71.589E-03 Current time 2026-02-10 37440.158499; dt=0.086911 Current time 2026-02-10 37441.027112; dt=0.086807 Current time 2026-02-10 37441.894368; dt=0.086654 Current time 2026-02-10 37442.759907; dt=0.086467 Current time 2026-02-10 37443.623367; dt=0.086229 Current time 2026-02-10 37444.483957; dt=0.085914 Current time 2026-02-10 37445.340463; dt=0.085371 Current time 2026-02-10 37446.190258; dt=0.084660 Current time 2026-02-10 37447.033000; dt=0.083959 Current time 2026-02-10 37447.868849; dt=0.083284 Current time 2026-02-10 37448.698098; dt=0.082638 Current time 2026-02-10 37449.521140; dt=0.082036 Current time 2026-02-10 37450.338417; dt=0.081484 Current time 2026-02-10 37451.150426; dt=0.080979 Current time 2026-02-10 37451.957688; dt=0.080526 Current time 2026-02-10 37452.760157; dt=0.079944 Current time 2026-02-10 37453.555821; dt=0.079273 Current time 2026-02-10 37454.345352; dt=0.078707 Current time 2026-02-10 37455.129833; dt=0.078253 Current time 2026-02-10 37455.910402; dt=0.077916 Current time 2026-02-10 37456.688250; dt=0.077695 Current time 2026-02-10 37457.464462; dt=0.077573 Current time 2026-02-10 37458.239855; dt=0.077519 Current time 2026-02-10 37459.014952; dt=0.077507 Current time 2026-02-10 37459.790082; dt=0.077521 Current time 2026-02-10 37460.565441; dt=0.077550 Current time 2026-02-10 37461.341155; dt=0.077590 Current time 2026-02-10 37462.117300; dt=0.077636 Current time 2026-02-10 37462.893957; dt=0.077691 Current time 2026-02-10 37463.671187; dt=0.077749 Current time 2026-02-10 37464.449030; dt=0.077814 Current time 2026-02-10 37465.227532; dt=0.077880 Current time 2026-02-10 37466.006720; dt=0.077952 Current time 2026-02-10 37466.786646; dt=0.078026 Current time 2026-02-10 37467.567322; dt=0.078103 Current time 2026-02-10 37468.348797; dt=0.078184 Current time 2026-02-10 37469.131080; dt=0.078265 Current time 2026-02-10 37469.914206; dt=0.078352 Current time 2026-02-10 37470.698191; dt=0.078437 Current time 2026-02-10 37471.483034; dt=0.078522 Current time 2026-02-10 37472.268726; dt=0.078608 Current time 2026-02-10 37473.055291; dt=0.078697 Current time 2026-02-10 37473.842729; dt=0.078781 Current time 2026-02-10 37474.630975; dt=0.078861 Current time 2026-02-10 37475.420032; dt=0.078943 Current time 2026-02-10 37476.209916; dt=0.079026 Current time 2026-02-10 37477.000635; dt=0.079109 Current time 2026-02-10 37477.792174; dt=0.079191 Current time 2026-02-10 37478.584543; dt=0.079275 Current time 2026-02-10 37479.377755; dt=0.079359 Current time 2026-02-10 37480.171815; dt=0.079444 Current time 2026-02-10 37480.966707; dt=0.079527 Current time 2026-02-10 37481.762435; dt=0.079611 Current time 2026-02-10 37482.559007; dt=0.079695 Current time 2026-02-10 37483.356430; dt=0.079781 Current time 2026-02-10 37484.154708; dt=0.079866 Current time 2026-02-10 37484.953832; dt=0.079950 Current time 2026-02-10 37485.753792; dt=0.080034 Current time 2026-02-10 37486.554592; dt=0.080118 Current time 2026-02-10 37487.356232; dt=0.080202 Current time 2026-02-10 37488.158716; dt=0.080286 Current time 2026-02-10 37488.962043; dt=0.080371 Current time 2026-02-10 37489.766211; dt=0.080454 Current time 2026-02-10 37490.571202; dt=0.080536 Current time 2026-02-10 37491.377016; dt=0.080618 Current time 2026-02-10 37492.183651; dt=0.080700 Current time 2026-02-10 37492.991107; dt=0.080783 Current time 2026-02-10 37493.799383; dt=0.080865 Current time 2026-02-10 37494.608479; dt=0.080947 Current time 2026-02-10 37495.418395; dt=0.081028 Current time 2026-02-10 37496.229129; dt=0.081110 Current time 2026-02-10 37497.040672; dt=0.081190 Current time 2026-02-10 37497.853015; dt=0.081270 Current time 2026-02-10 37498.666154; dt=0.081350 Current time 2026-02-10 37499.479500; dt=0.081320 System sizes according to Phiall: 173 64 158 -->Number of user-defined output variables: 9 HDF5 Output file name: //dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/gneiss_debug/20260210_37500.000000.h5 INFO: Input file has selected full output or milestones, large files may result! Writing topside boundary conditions for non-inverted-type grid... Throttling dt to: 65.297E-03 Current time 2026-02-10 37500.227887; dt=0.081292 Current time 2026-02-10 37501.040696; dt=0.081275 Current time 2026-02-10 37501.853444; dt=0.081277 Current time 2026-02-10 37502.666284; dt=0.081291 Current time 2026-02-10 37503.479327; dt=0.081316 Current time 2026-02-10 37504.292656; dt=0.081347 Current time 2026-02-10 37505.106325; dt=0.081384 Current time 2026-02-10 37505.920380; dt=0.081423 Current time 2026-02-10 37506.734819; dt=0.081461 Current time 2026-02-10 37507.549656; dt=0.081502 Current time 2026-02-10 37508.364901; dt=0.081539 Current time 2026-02-10 37509.180416; dt=0.081562 Current time 2026-02-10 37509.996162; dt=0.081585 Current time 2026-02-10 37510.812143; dt=0.081609 Current time 2026-02-10 37511.628360; dt=0.081633 Current time 2026-02-10 37512.444817; dt=0.081657 Current time 2026-02-10 37513.261516; dt=0.081681 Current time 2026-02-10 37514.078460; dt=0.081706 Current time 2026-02-10 37514.895654; dt=0.081731 Current time 2026-02-10 37515.713097; dt=0.081756 Current time 2026-02-10 37516.530794; dt=0.081781 Current time 2026-02-10 37517.348751; dt=0.081808 Current time 2026-02-10 37518.166980; dt=0.081835 Current time 2026-02-10 37518.985490; dt=0.081864 Current time 2026-02-10 37519.804294; dt=0.081894 Current time 2026-02-10 37520.623405; dt=0.081925 Current time 2026-02-10 37521.442839; dt=0.081958 Current time 2026-02-10 37522.262478; dt=0.081964 Current time 2026-02-10 37523.082124; dt=0.081965 Current time 2026-02-10 37523.901774; dt=0.081965 Current time 2026-02-10 37524.721431; dt=0.081966 Current time 2026-02-10 37525.540970; dt=0.081942 Current time 2026-02-10 37526.360242; dt=0.081916 Current time 2026-02-10 37527.179269; dt=0.081892 Current time 2026-02-10 37527.998074; dt=0.081871 Current time 2026-02-10 37528.816679; dt=0.081852 Current time 2026-02-10 37529.635108; dt=0.081836 Current time 2026-02-10 37530.453384; dt=0.081822 Current time 2026-02-10 37531.271534; dt=0.081810 Current time 2026-02-10 37532.089586; dt=0.081802 Current time 2026-02-10 37532.907568; dt=0.081796 Current time 2026-02-10 37533.725516; dt=0.081794 Current time 2026-02-10 37534.543464; dt=0.081796 Current time 2026-02-10 37535.361452; dt=0.081802 Current time 2026-02-10 37536.179524; dt=0.081812 Current time 2026-02-10 37536.997725; dt=0.081827 Current time 2026-02-10 37537.816107; dt=0.081848 Current time 2026-02-10 37538.634725; dt=0.081874 Current time 2026-02-10 37539.453642; dt=0.081907 Current time 2026-02-10 37540.272925; dt=0.081947 Current time 2026-02-10 37541.092649; dt=0.081995 Current time 2026-02-10 37541.912898; dt=0.082051 Current time 2026-02-10 37542.733750; dt=0.082115