16 MPI processes detected /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 7 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 9 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 10 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 11 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 12 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 13 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 14 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 15 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 0 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 1 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 2 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 3 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 4 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 5 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 6 / 15 at 20240208T160613.248 /dartfs-hpc/rc/lab/L/LynchK/gemini_disco/gemini3d/build/gemini.bin Process: 8 / 15 at 20240208T160613.248 ******************** input config **************** simulation directory: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76 start year-month-day: 2017-03-02 start time: 28360.000 duration: 90.000 output every: 5.000 gemini.f90: using input data files: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/simsize.h5 /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/simgrid.h5 /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/initial_conditions.h5 no neutral disturbance specified. Precipitation file input cadence (s): 5.000 Precipitation file input source directory: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Electric field file input cadence (s): 5.0000000000000000 Electric field file input source directory: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/fields GLOW disabled MSISE00 enabled for neutral atmosphere calculations. EIA disabled Variable background neutral atmosphere disabled. Background precipitation has total energy flux and energy: 10.000000000000000 1000.0000000000000 Parallel current calculation enabled. Inertial capacitance calculation type: 0 Diffusion solve type: 2 Milestone output disabled. Gravitaional drift terms disabled. Lagrangian grid disabled **************** end input config *************** grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:10 at process grid location: 2 2 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:7 at process grid location: 3 1 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:6 at process grid location: 2 1 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:0 at process grid location: 0 0 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:1 at process grid location: 1 0 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:13 at process grid location: 1 3 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:5 at process grid location: 1 1 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:14 at process grid location: 2 3 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:9 at process grid location: 1 2 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:2 at process grid location: 2 0 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:3 at process grid location: 3 0 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:15 at process grid location: 3 3 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:11 at process grid location: 3 2 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:8 at process grid location: 0 2 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:4 at process grid location: 0 1 get_subgrid_size: 3D run grid_size_root: full grid size: 215 128 512 process grid (Number MPI processes) x2, x3: 4 4 Process:12 at process grid location: 0 3 get_subgrid_size: 3D run Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 Detected Cartesian grid... cart:calc_coord_diffs done cart:init_storage done make_cartmesh: allocating space for grid of size: 219 36 132 make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: geographic coordinates from magnetic... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell centers... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell q-interfaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell p-intefaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: metric factors for cell phi-interfaces... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: spherical ECEF unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: base type-bound procedure calls... make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: base type-bound procedure calls... make_cartmesh: cartesian unit vectors... make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: base type-bound procedure calls... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: cartesian unit vectors... make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: cartesian unit vectors... make_cartmesh: magnetic fields... make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: base type-bound procedure calls... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: magnetic fields... make_cartmesh: base type-bound procedure calls... make_cartmesh: gravity... 219 36 132 make_cartmesh: base type-bound procedure calls... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: gravity... 219 36 132 make_cartmesh: magnetic fields... make_cartmesh: magnetic fields... make_cartmesh: base type-bound procedure calls... make_cartmesh: base type-bound procedure calls... make_cartmesh: gravity... 219 36 132 make_cartmesh: gravity... 219 36 132 make_cartmesh: gravity... 219 36 132 make_cartmesh: base type-bound procedure calls... make_cartmesh: magnetic fields... make_cartmesh: base type-bound procedure calls... make_cartmesh: gravity... 219 36 132 make_cartmesh: base type-bound procedure calls... make_cartmesh: base type-bound procedure calls... make_cartmesh: base type-bound procedure calls... make_cartmesh: base type-bound procedure calls... make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: base type-bound procedure calls... make_cartmesh: inclination angle... make_cartmesh done init_storage_root done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: base type-bound procedure calls... make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done make_cartmesh: inclination angle... make_cartmesh done enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... gather_grid_root done calc_coord_diffs_root done enforce_gridmpi_periodic done grid_check done Done with read_grid_in... Starting from beginning of simulation... /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/simsize.h5 input dimensions: 215 128 512 Target (output) grid structure dimensions: 215 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Precipitation size: llon,llat: 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation size: llon,llat: 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation size: llon,llat: 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Sent ICs to workers in 1.811E+00 seconds. Precipitation size: llon,llat: 128 512 Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Precipitation size: llon,llat: 128 512 Precipitation size: llon,llat: 128 512 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation size: llon,llat: 128 512 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation size: llon,llat: 128 512 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation size: llon,llat: 128 512 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Initial conditions (root): ------------------------ Min/max input density: 3.57E+08 1.81E+10 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Min/max input velocity: -3.11E+02 2.28E+01 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Min/max input temperature: 1.79E+02 1.41E+03 Min/max input electric potential: 0.00E+00 0.00E+00 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Min/max input electric potential (full grid): 0.00E+00 0.00E+00 Priming electric field input Precipitation input: -------------------- READ precipitation size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/particles Precipitation size: llon,llat: 128 512 Precipitation mlon,mlat extent: 256.600 261.788 66.091 67.199 Priming dataset: electron precipitation prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Electric field input: -------------------- READ electric field size from: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/fields Electric field size: llon,llat: -1 -1 !!!!! efielddata detected a direct fill of input arrays (no interpolation) !!!!! Electric field mlon,mlat extent: 256.600 261.788 66.091 67.199 Preparing to prime input data arrays... Priming dataset: electric field boundary conditions date and time: 2017 3 2 28360.000000000000 efield filename: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/fields/20170302_28360.000000 date and time: 2017 3 2 28365.000000000000 efield filename: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/fields/20170302_28365.000000 prime times: 0.0000000000000000 5.0000000000000000 prime reference date: 2017 3 2 28360.000000000000 2017 3 2 28365.000000000000 Recomputed initial dist. fields via pot2perpfield: gemini 0.0000000000000000 0.0000000000000000 gemini 0.0000000000000000 0.0000000000000000 gemini 0.0000000000000000 0.0000000000000000 gemini 0.0000000000000000 0.0000000000000000 Recomputed initial fields including background (BGfieldLagrangian): 0.0000000000000000 0.0000000000000000 -2.3420413956046104E-002 -2.3420413956046104E-002 -5.4306169040501118E-003 -5.4306169040501118E-003 Priming precipitation input Computing background and priming neutral perturbation input (if used) Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8446679999999986 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8431840000000008 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8517580000000002 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8414579999999994 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8675129999999989 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8410060000000001 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8561520000000016 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8442879999999988 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8420260000000006 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8622990000000001 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8478569999999976 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8664569999999969 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8826299999999989 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.9195669999999971 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.8907530000000001 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.37243499999999941 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.39279499999999956 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.39320599999999928 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.39770799999999795 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.40277800000000141 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.39761399999999725 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.37822300000000197 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.40819199999999967 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.38066700000000253 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.39869200000000049 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.37028600000000012 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.37921900000000264 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.37803600000000159 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.44289600000000107 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.42813699999999955 Initial neutral density and temperature (from MSIS) at time: 2017 3 2 28360.000000000000 calculated in time: 4.9100939999999973 Initial neutral winds (from HWM) at time: 2017 3 2 28360.000000000000 calculated in time: 0.34513399999999805 Recomputed initial drifts: -186.11167344027291 176.91316409250132 -474.62197107658653 0.0000000000000000 Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Filling ghost cells with global reference variables. Current time 2017-03-02 28360.000001; dt=0.000001 System sizes according to Phiall: 215 128 512 HDF5 Output file name: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/20170302_28360.000000.h5 INFO: Input file has selected full output or milestones, large files may result! Writing topside boundary conditions for non-inverted-type grid... Throttling dt to: 2.000E-06 Current time 2017-03-02 28360.000003; dt=0.000002 Throttling dt to: 4.000E-06 Current time 2017-03-02 28360.000007; dt=0.000004 Throttling dt to: 8.000E-06 Current time 2017-03-02 28360.000015; dt=0.000008 Throttling dt to: 16.000E-06 Current time 2017-03-02 28360.000031; dt=0.000016 Throttling dt to: 32.000E-06 Current time 2017-03-02 28360.000063; dt=0.000032 Throttling dt to: 64.000E-06 Current time 2017-03-02 28360.000127; dt=0.000064 Throttling dt to: 128.000E-06 Current time 2017-03-02 28360.000255; dt=0.000128 Throttling dt to: 256.000E-06 Current time 2017-03-02 28360.000511; dt=0.000256 Throttling dt to: 512.000E-06 Current time 2017-03-02 28360.001023; dt=0.000512 Throttling dt to: 1.024E-03 Current time 2017-03-02 28360.002047; dt=0.001024 Throttling dt to: 2.048E-03 Current time 2017-03-02 28360.004095; dt=0.002048 Throttling dt to: 4.096E-03 Current time 2017-03-02 28360.008191; dt=0.004096 Throttling dt to: 8.192E-03 Current time 2017-03-02 28360.016383; dt=0.008192 Throttling dt to: 16.384E-03 Current time 2017-03-02 28360.032767; dt=0.016384 Throttling dt to: 32.768E-03 Current time 2017-03-02 28360.065535; dt=0.032768 Throttling dt to: 65.536E-03 Current time 2017-03-02 28360.131071; dt=0.065536 Current time 2017-03-02 28360.240744; dt=0.109673 Current time 2017-03-02 28360.334438; dt=0.093695 Current time 2017-03-02 28360.419211; dt=0.084773 Current time 2017-03-02 28360.498252; dt=0.079041 Current time 2017-03-02 28360.573219; dt=0.074966 Current time 2017-03-02 28360.645104; dt=0.071885 Current time 2017-03-02 28360.714546; dt=0.069442 Current time 2017-03-02 28360.782010; dt=0.067464 Current time 2017-03-02 28360.847820; dt=0.065811 Current time 2017-03-02 28360.912239; dt=0.064418 Current time 2017-03-02 28360.975458; dt=0.063219 Current time 2017-03-02 28361.037642; dt=0.062184 Current time 2017-03-02 28361.098917; dt=0.061276 Current time 2017-03-02 28361.159396; dt=0.060478 Current time 2017-03-02 28361.219167; dt=0.059771 Current time 2017-03-02 28361.278312; dt=0.059144 Current time 2017-03-02 28361.336897; dt=0.058585 Current time 2017-03-02 28361.394979; dt=0.058083 Current time 2017-03-02 28361.452616; dt=0.057637 Current time 2017-03-02 28361.509848; dt=0.057232 Current time 2017-03-02 28361.566723; dt=0.056875 Current time 2017-03-02 28361.623272; dt=0.056549 Current time 2017-03-02 28361.679530; dt=0.056258 Current time 2017-03-02 28361.735529; dt=0.055999 Current time 2017-03-02 28361.791290; dt=0.055761 Current time 2017-03-02 28361.846841; dt=0.055551 Current time 2017-03-02 28361.902205; dt=0.055365 Current time 2017-03-02 28361.957400; dt=0.055195 Current time 2017-03-02 28362.012445; dt=0.055045 Current time 2017-03-02 28362.067361; dt=0.054916 Current time 2017-03-02 28362.122167; dt=0.054805 Current time 2017-03-02 28362.176877; dt=0.054711 Current time 2017-03-02 28362.231512; dt=0.054635 Current time 2017-03-02 28362.286089; dt=0.054577 Current time 2017-03-02 28362.340617; dt=0.054528 Current time 2017-03-02 28362.395111; dt=0.054494 Current time 2017-03-02 28362.449576; dt=0.054464 Current time 2017-03-02 28362.504018; dt=0.054442 Current time 2017-03-02 28362.558442; dt=0.054425 Current time 2017-03-02 28362.612852; dt=0.054410 Current time 2017-03-02 28362.667251; dt=0.054399 Current time 2017-03-02 28362.721642; dt=0.054391 Current time 2017-03-02 28362.776028; dt=0.054386 Current time 2017-03-02 28362.830410; dt=0.054382 Current time 2017-03-02 28362.884790; dt=0.054379 Current time 2017-03-02 28362.939168; dt=0.054378 Current time 2017-03-02 28362.993546; dt=0.054378 Current time 2017-03-02 28363.047926; dt=0.054380 Current time 2017-03-02 28363.102309; dt=0.054383 Current time 2017-03-02 28363.156695; dt=0.054387 Current time 2017-03-02 28363.211087; dt=0.054391 Current time 2017-03-02 28363.265484; dt=0.054397 Current time 2017-03-02 28363.319888; dt=0.054404 Current time 2017-03-02 28363.374300; dt=0.054412 Current time 2017-03-02 28363.428720; dt=0.054420 Current time 2017-03-02 28363.483149; dt=0.054429 Current time 2017-03-02 28363.537588; dt=0.054439 Current time 2017-03-02 28363.592037; dt=0.054449 Current time 2017-03-02 28363.646496; dt=0.054460 Current time 2017-03-02 28363.700967; dt=0.054471 Current time 2017-03-02 28363.755451; dt=0.054483 Current time 2017-03-02 28363.809928; dt=0.054477 Current time 2017-03-02 28363.864393; dt=0.054465 Current time 2017-03-02 28363.918847; dt=0.054454 Current time 2017-03-02 28363.973291; dt=0.054443 Current time 2017-03-02 28364.027724; dt=0.054433 Current time 2017-03-02 28364.082147; dt=0.054423 Current time 2017-03-02 28364.136560; dt=0.054414 Current time 2017-03-02 28364.190965; dt=0.054405 Current time 2017-03-02 28364.245361; dt=0.054396 Current time 2017-03-02 28364.299750; dt=0.054388 Current time 2017-03-02 28364.354130; dt=0.054381 Current time 2017-03-02 28364.408504; dt=0.054373 Current time 2017-03-02 28364.462870; dt=0.054366 Current time 2017-03-02 28364.517229; dt=0.054359 Current time 2017-03-02 28364.571582; dt=0.054353 Current time 2017-03-02 28364.625928; dt=0.054346 Current time 2017-03-02 28364.680267; dt=0.054340 Current time 2017-03-02 28364.734601; dt=0.054333 Current time 2017-03-02 28364.788927; dt=0.054327 Current time 2017-03-02 28364.843248; dt=0.054320 Current time 2017-03-02 28364.897562; dt=0.054314 Current time 2017-03-02 28364.951869; dt=0.054308 Current time 2017-03-02 28365.000000; dt=0.048131 System sizes according to Phiall: 215 128 512 HDF5 Output file name: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/20170302_28365.000000.h5 INFO: Input file has selected full output or milestones, large files may result! Writing topside boundary conditions for non-inverted-type grid... date and time: 2017 3 2 28370.000000000000 efield filename: /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_76/inputs/fields/20170302_28370.000000 Current time 2017-03-02 28365.054325; dt=0.054325 Current time 2017-03-02 28365.108620; dt=0.054295 Current time 2017-03-02 28365.162926; dt=0.054306 Current time 2017-03-02 28365.217241; dt=0.054316 Current time 2017-03-02 28365.271567; dt=0.054326 Current time 2017-03-02 28365.325904; dt=0.054337 Current time 2017-03-02 28365.380252; dt=0.054348 Current time 2017-03-02 28365.434611; dt=0.054360 Current time 2017-03-02 28365.488983; dt=0.054372 Current time 2017-03-02 28365.543368; dt=0.054385 Current time 2017-03-02 28365.597766; dt=0.054398 Current time 2017-03-02 28365.652178; dt=0.054412 Current time 2017-03-02 28365.706603; dt=0.054425 Current time 2017-03-02 28365.761043; dt=0.054440 Current time 2017-03-02 28365.815497; dt=0.054454 Current time 2017-03-02 28365.869967; dt=0.054470 Current time 2017-03-02 28365.924452; dt=0.054485 Current time 2017-03-02 28365.978954; dt=0.054502