-------------------------------------------------------------------------- WARNING: There is at least non-excluded one OpenFabrics device found, but there are no active ports detected (or Open MPI was unable to use them). This is most certainly not what you wanted. Check your cables, subnet manager configuration, etc. The openib BTL will be ignored for this job. Local host: s23 -------------------------------------------------------------------------- [s23.hpcc.dartmouth.edu:52328] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52329] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52331] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52332] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52333] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52334] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52335] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52336] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52337] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52322] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52323] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52324] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52325] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52326] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52327] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52330] mca_base_component_repository_open: unable to open mca_mtl_psm: libpsm_infinipath.so.1: cannot open shared object file: No such file or directory (ignored) [s23.hpcc.dartmouth.edu:52318] 15 more processes have sent help message help-mpi-btl-openib.txt / no active ports found [s23.hpcc.dartmouth.edu:52318] Set MCA parameter "orte_base_help_aggregate" to 0 to see all help / error messages {Error using jules.tools.images2video Fewer than 2 image files with extension png in /dartfs-hpc/rc/lab/L/LynchK/public_html/Gemini3D/isinglass_78/plots/Thumbs.db. Error in jules.sim.process (line 28) jules.tools.images2video(direc,fullfile('plots',plots_name)) }