analysis:amplipex:artifacts
====== Differences ====== This shows you the differences between two versions of the page.
| Both sides previous revision Previous revision Next revision | Previous revision | ||
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analysis:amplipex:artifacts [2014/01/20 19:59] ecarmichael |
analysis:amplipex:artifacts [2018/04/17 15:20] (current) |
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| cfg.coninuous = 'yes'; | cfg.coninuous = 'yes'; | ||
| cfg.viewmode = 'vertical'; % this shows all of the channels vertically | cfg.viewmode = 'vertical'; % this shows all of the channels vertically | ||
| - | cfg = ft_databrowser(cfg,data_art_rem); | + | cfg = ft_databrowser(cfg,data_trl); |
| + | data_trl.cfg = cfg; % rewrite the cfg back into the data set | ||
| </code> | </code> | ||
| Line 27: | Line 28: | ||
| {{:analysis:amplipex:artifact_wiki.png?750|}} | {{:analysis:amplipex:artifact_wiki.png?750|}} | ||
| - | The selected artifact regions are not altered within the data itself, instead the start and end of each artifact are saved as part of the cfg structure: data_trl.cfg.artfctdef.visual.artifact . From here we can change these regions to values of our choice. | + | The selected artifact regions are not altered within the data itself, instead the start and end of each artifact are saved as part of the cfg structure: data_trl.cfg.artfctdef.visual.artifact . So now can change these regions to any value of our choice. |
| Line 33: | Line 34: | ||
| %% Mannual Artifact removal | %% Mannual Artifact removal | ||
| art_value = 0; %Value to replace the data within artifact regions | art_value = 0; %Value to replace the data within artifact regions | ||
| - | artifacts = data_art_rem.cfg.artfctdef.visual.artifact; | + | artifacts = data_trl.cfg.artfctdef.visual.artifact; |
| - | trials = data_art_rem.cfg.trl; | + | trials = data_trl.cfg.trl; |
| for iArt = 1:length(artifacts) | for iArt = 1:length(artifacts) | ||
| for iTrial = 1:length(trials) | for iTrial = 1:length(trials) | ||
| if trials(iTrial,1)<= artifacts(iArt,1) && trials(iTrial,2)>= artifacts(iArt,2) | if trials(iTrial,1)<= artifacts(iArt,1) && trials(iTrial,2)>= artifacts(iArt,2) | ||
| if artifacts(iArt,1)-trials(iTrial,1) ==0 | if artifacts(iArt,1)-trials(iTrial,1) ==0 | ||
| - | data_art_rem.trial{1,iTrial}(1:16,(1:artifacts(iArt,2)-trials(iTrial,1)))=art_value; | + | data_trl.trial{1,iTrial}(1:16,(1:artifacts(iArt,2)-trials(iTrial,1)))=art_value; |
| else | else | ||
| - | data_art_rem.trial{1,iTrial}(1:16,(artifacts(iArt,1)-trials(iTrial,1):artifacts(iArt,2)-trials(iTrial,1)))=art_value; | + | data_trl.trial{1,iTrial}(1:16,(artifacts(iArt,1)-trials(iTrial,1):artifacts(iArt,2)-trials(iTrial,1)))=art_value; |
| end | end | ||
| end | end | ||
| Line 49: | Line 50: | ||
| - | From here we can visualize the | + | Now we can visualize the data regions that have been replaced to ensure they have been correctly converted. |
| + | |||
| + | <code matlab> | ||
| + | cfg.viewmode = 'vertical'; % this shows all of the channels vertically | ||
| + | ft_databrowser(cfg,data_trl); | ||
| + | </code> | ||
| + | |||
| + | From here we can run any further ft analysis. | ||
analysis/amplipex/artifacts.1390247944.txt.gz · Last modified: 2018/04/17 15:21 (external edit)
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