analysis:matlab-overview
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| - | ====== Overview of common functions ====== | ||
| - | ===== Utility functions ===== | ||
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| - | ==== Utility functions common to multiple data types ==== | ||
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| - | * restrict(): restricts times in data object (iv, ts, tsd) to specific intervals | ||
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| - | ==== Utility functions associated with specific data types ==== | ||
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| - | === interval (iv) === | ||
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| - | Basics: | ||
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| - | * iv(): constructor | ||
| - | * CheckIV(): check integrity of iv struct | ||
| - | * SelectIV(): specify intervals to keep | ||
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| - | Simple operations: | ||
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| - | * ResizeIV(): expand or contract intervals by specified amount | ||
| - | * InvertIV(): "flips" included intervals to non-included, and vice versa | ||
| - | * MergeIV(): merge touching, overlapping, or nearby intervals within an iv struct | ||
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| - | Set operations: | ||
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| - | * UnionIV(): set union of iv objects | ||
| - | * IntersectIV(): set intersect, keep only those iv1's that include a piece of iv2 | ||
| - | * DifferenceIV(): set difference, keep only those iv1's that DO NOT include a piece of iv2 | ||
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| - | Analysis operations: | ||
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| - | * TSDtoIV(): create interval data from tsd by tresholding | ||
| - | * MultiRaster(): see below | ||
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| - | Visualization: | ||
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| - | * PlotTSDfromIV(): display intervals defined relative to tsd | ||
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| - | === timestamps ([[ts | https://github.com/vandermeerlab/vandermeerlab/tree/master/code-matlab/shared/datatypes/ts]]) === | ||
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| - | Basics: | ||
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| - | * [[ts() | https://github.com/vandermeerlab/vandermeerlab/blob/master/code-matlab/shared/datatypes/ts/ts.m]]: constructor | ||
| - | * CheckTS(): check integrity of ts struct | ||
| - | * SelectTS(): specify ts data to keep. (Also performs reordering) | ||
| - | * concatenateTS(): concatenate two ts objects | ||
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| - | Analysis operations: | ||
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| - | * getSpikeCount(): returns spike counts (number of spikes) in a nCells x 1 vector of ts input | ||
| - | * ShuffleTS(): shuffle spikes in ts struct | ||
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| - | Visualization: | ||
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| - | * MultiRaster(): see below | ||
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| - | === timestamped data (tsd) === | ||
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| - | === tuning curve (tc) === | ||
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| - | ==== Low-level utility functions ==== | ||
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| - | * nearest_idx3(): | ||
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| - | ===== Visualization functions ===== | ||
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| - | ===== Loading/converting functions ===== | ||
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| - | ===== Analysis functions ===== | ||
analysis/matlab-overview.txt ยท Last modified: 2018/07/07 10:19 (external edit)
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