analysis:nsb2015:week1
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analysis:nsb2015:week1 [2015/07/20 17:28] mvdm [Module 1: Setting up] |
analysis:nsb2015:week1 [2016/01/04 17:51] course-w16 |
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| * Optional: MATLAB documentation on [[http://www.mathworks.com/help/matlab/matlab_env/understanding-file-locations-in-matlab.html|File Locations]] and [[http://www.mathworks.com/help/matlab/matlab_env/what-is-the-matlab-search-path.html#br8ch8o|Search Paths]] | * Optional: MATLAB documentation on [[http://www.mathworks.com/help/matlab/matlab_env/understanding-file-locations-in-matlab.html|File Locations]] and [[http://www.mathworks.com/help/matlab/matlab_env/what-is-the-matlab-search-path.html#br8ch8o|Search Paths]] | ||
| - | **NOTE**: if you are using NS&B lab computers, many of the steps below will already have been done. I recommend you read through them anyway, but check if things are already installed or set up before duplicating things! | + | **NOTE**: if you are using NS&B lab computers, some or all of the steps below may already have been done. I recommend you read through them anyway, but check if things are already installed or set up before duplicating things! |
| Step-by-step: | Step-by-step: | ||
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| The choice of the folder name ''promoted'' indicates that these are data folders for which preprocessing is completed. As explained further in Module 2, preprocessing typically includes the renaming of raw data files, annotation, spike sorting, and a few other steps. In general, it is useful to keep promoted data separate from data still in process. | The choice of the folder name ''promoted'' indicates that these are data folders for which preprocessing is completed. As explained further in Module 2, preprocessing typically includes the renaming of raw data files, annotation, spike sorting, and a few other steps. In general, it is useful to keep promoted data separate from data still in process. | ||
| - | If you cannot access the NS&B share, use a %%FTP%% client such as [[https://filezilla-project.org/|Filezilla]] to connect to the lab %%FTP%% server, ''mvdmlab-nas1'' (129.97.62.84). Configure your %%FTP%% client to require "explicit %%FTP%% over %%TLS%%" and use ''BIOL680'' as username and password. | + | If you cannot access the NS&B share, use a %%FTP%% client such as [[https://filezilla-project.org/|Filezilla]] to connect to the lab %%FTP%% server at **129.170.31.15**, use the following login settings (FileZilla): |
| - | Correct FileZilla configuration is the following: | + | {{ :analysis:nsb2015:d-datavault-info.png?600 |}} |
| - | + | ||
| - | {{ :analysis:course:ftp_config.png?600 |}} | + | |
| If you cannot log in to the server, send me your IP address and I will enable access for you. | If you cannot log in to the server, send me your IP address and I will enable access for you. | ||
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| </code> | </code> | ||
| - | You should see some interesting oscillations -- we will explore these in detail in upcoming modules. If you see this, you have successfully completed this module! | + | You should see some interesting oscillations -- we will explore these in detail in upcoming modules. If you see this, you have successfully completed this introductory module! |
| {{ :analysis:nsb2014:verify.png?600 |}} | {{ :analysis:nsb2014:verify.png?600 |}} | ||
| - | === Folder and file naming === | ||
| - | |||
| - | FIXME | ||
| === For Mac/OS X users === | === For Mac/OS X users === | ||
analysis/nsb2015/week1.txt · Last modified: 2018/07/07 10:19 (external edit)
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