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analysis:rhythms
This is an old revision of the document!
Welcome! This is the home page for the optional hands-on (heads-on) 2016 edition of the “Rhythmic Brain” course.
Contents
(more will be added as we go along)
Getting started with MATLAB
Depending on your background and programming experience you might find the following resources helpful:
- Textbook: Wallisch, MATLAB for Neuroscientists
- Cody, a continually expanding set of problems with solutions to work through, with a points system to track your progress
If you are unsure, take a look at the table of contents of the MATLAB Primer in the link above. If there are things you don't recognize, use the Primer itself, or Chapter 2 of the MATLAB for Neuroscientists book to get up to speed. If you've never used MATLAB, definitely start with the steps in the Primer.
Regardless of your MATLAB abilities, some great ways to keep learning are:
- Mathworks staff blogs, especially “Loren on the Art of MATLAB” is a treasure trove of tips and tricks
- MATLAB questions on StackOverflow, a Q&A site where you can browse previous questions and add new ones
If you have no formal training in computer programming (i.e. you have never taken a “Intro to Computer Science” or “Introductory Programming” type course) a great introduction to the “Zen of programming” is to do the pen-and-paper exercises in this short chapter by Daniel Dennett (“The Secrets of Computer Power Revealed”) before you embark on the MATLAB primer linked to above. Most people find it frustrating at first, but rewarding if they stick with it for a few hours.
Resources
Emotiv documentation:
The following textbooks provide more in-depth treatment of some of the topics we touch on in the course:
- Textbook: Leis, Digital Signal Processing using MATLAB for Students and Researchers
- Textbook: Johnston and Wu, Foundations of Cellular Neurophysiology
- Textbook: Dayan & Abbott, Theoretical Neuroscience
These are selected modules from a graduate course I teach on neural data analysis:
Note for Linux users
The tutorials provided here are set up for machines running 64-bit Windows 7 or Mac OS X. If you want to use Linux or some other OS you will probably need to compile some of the low-level loading functions yourself. Some pointers for this are provided in subsequent modules when loading is introduced.
Discussion
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