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analysis:nsb2015 [2015/07/16 17:12] mvdm [What this course is not] |
analysis:nsb2015 [2018/07/07 10:19] (current) |
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=== Contents === | === Contents === | ||
+ | |||
+ | == Fundamentals == | ||
* [[analysis:nsb2015:week1|Module 1: Setting up (MATLAB, paths, GitHub, lab database)]] | * [[analysis:nsb2015:week1|Module 1: Setting up (MATLAB, paths, GitHub, lab database)]] | ||
* [[analysis:nsb2015:week2|Module 2: Introduction to Neuralynx data formats and preprocessing]] | * [[analysis:nsb2015:week2|Module 2: Introduction to Neuralynx data formats and preprocessing]] | ||
- | * [[analysis:nsb2015:week3|Module 3: Anatomy of neural data: time series, sampling, aliasing]] | + | * Module 3: Visualizing raw neural data in MATLAB ([[analysis:nsb2015:week3long|long version]] to learn the guts, [[analysis:nsb2015:week3short|short version]] to just get stuff done) |
+ | |||
+ | == Spike data basics == | ||
* [[analysis:nsb2015:week4|Module 4: Spike sorting]] | * [[analysis:nsb2015:week4|Module 4: Spike sorting]] | ||
- | * [[analysis:nsb2015:week5|Module 5: Visualizing neural data in MATLAB]] | + | * [[analysis:nsb2015:week11|Module 11: Spike train analysis: firing rate, interspike interval distributions, auto- and crosscorrelations]] |
+ | * [[analysis:nsb2015:week12|Module 12: Spike train analysis II: tuning curves, encoding, decoding]] | ||
+ | |||
+ | == Local field potential data basics == | ||
* [[analysis:nsb2015:week6|Module 6: Fourier series, transforms, power spectra]] | * [[analysis:nsb2015:week6|Module 6: Fourier series, transforms, power spectra]] | ||
* [[analysis:nsb2015:week7|Module 7: Filtering: filter design, use, caveats]] | * [[analysis:nsb2015:week7|Module 7: Filtering: filter design, use, caveats]] | ||
* [[analysis:nsb2015:week8|Module 8: Time-frequency analysis: spectrograms]] | * [[analysis:nsb2015:week8|Module 8: Time-frequency analysis: spectrograms]] | ||
+ | |||
+ | == Intermediate topics == | ||
+ | |||
* [[analysis:nsb2015:week9|Module 9: Time-frequency analysis II: cross-frequency coupling]] | * [[analysis:nsb2015:week9|Module 9: Time-frequency analysis II: cross-frequency coupling]] | ||
- | * [[analysis:nsb2015:week10|Module 10: Interactions between multiple signals: coherence and other connectivity measures]] | + | * [[analysis:nsb2015:week10|Module 10: Interactions between multiple signals: coherence and other connectivity measures]] |
- | * [[analysis:nsb2015:week11|Module 11: Spike train analysis: firing rate, interspike interval distributions, auto- and crosscorrelations]] | + | |
- | * [[analysis:nsb2015:week12|Module 12: Spike train analysis II: tuning curves, encoding, decoding]] | + | |
* [[analysis:nsb2015:week13|Module 13: Spike-field relationships: spike-triggered average, phase locking, phase precession]] | * [[analysis:nsb2015:week13|Module 13: Spike-field relationships: spike-triggered average, phase locking, phase precession]] | ||
- | * [[analysis:nsb2015:week0|Coda: Principles of careful data analysis]] | ||
+ | == Advanced topics == | ||
+ | |||
+ | * [[analysis:cosmo2014|Two-step Bayesian decoding with dynamic spatial priors]] | ||
+ | |||
+ | == Reference == | ||
+ | |||
+ | * [[analysis:nsb2015:week0|Coda: Principles of careful data analysis]] | ||
+ | |||
=== Prerequisites === | === Prerequisites === | ||